Locked History Actions

Community/Deployment/UniversityOfAlabamaAtBirmingham

University of Alabama Birmingham

Name of Deployment

Deployment

UAB Galaxy

Domain
NGS analysis: Genomics (reference and de novo), RNAseq, metagenomics, custom tools.
Owners

Collaboration between Center for Clinical and Translational Science and Research Computing

Audience
Informatics core, sequencing core, researchers and students at the institution
User Base
currently ~200
Server Topology
SGE Cluster (shared)
Compute

800+ cores

Memory

2.8TB of RAM: nodes range form 16G to 385G

Storage

Lustre on QDR/DDR Infiniband, plus OpenStack.

Disk Size
200+TB high performance storage, 500+TB data storage
User Management

Shibboleth based institutional authn.

Domain

NGS analysis: Genomics (reference and de novo), RNAseq, metagenomics, custom tools.

Community

Compute Infrastructure

Compute

Storage

Network

User Management

Authentication and Billing

Quotas

Customizations

Limitations and Challenges

Configuration and Setup

Maintaining and Meeting Needs

CategoryDeployment