Locked History Actions

Community/Log/2013/GenomeDownloadIndexingWithGalaxyRsyncServers

2013/02: Provide download and indexing of genomes using Galaxy rsync servers

Topic

Genome download & indexing using Galaxy rsync servers

Date
2013/02/21
Who

Brad Chapman

Resolution

Python script in CloudBioLinux.

Deployment

Implemented as a script in the CloudBioLinux GitHub repository.

Uses the CloudBioLinux data framework to install:

fab -f data_fabfile.py -H your_machine -c your_fabricrc.txt install_data_rsync:your_biodata.yaml

This is still a work in progress and doesn't support all genomes.

CategoryLog