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Events/ASMS2015

63rd ASMS Conference on Mass Spectrometry and Allied Topics

63rd ASMS Conference on Mass Spectrometry and Allied Topics

St. Louis, Missouri, United States

May 31 - June 4, 2015

Galaxy will again have a strong presence at the 2015 ASMS meeting.

Day

Time

Location

Presentation

Speaker

Links

June 1

5:45

Room 123/124

Workshop: The Galaxy Framework for MS-based Informatics

See below

June 2

8:50

Room 130/132

The quest for novel proteoforms: integration of proteomics and ribosome profiling based translatomics

Gerben Menschaert

Slides

9:50

Room 130/132

SearchGUI and PeptideShaker deployed in the Galaxy framework: A powerful informatics platform for protein identification and beyond

Ira Cooke

10:30

Poster Session, Odd Numbered

Poster TP 127: Democratizing and expanding the reach of DIA Mass Spectrometry: Developing OpenSWATH tools and workflows within user-friendly Galaxy-P platform.

Pratik Jagtap

Poster

Poster TP 131: Plugging Proteomics Peptide-Spectral Match Visualization into Galaxy

James Johnson

Poster

12:00

Poster Session, Even Numbered

Poster TP 366: Metaproteomic analysis of human cervical-vaginal fluid in residual Pap tests: Insights into the cervical microbiome

Tim Griffin

Poster TP 638: Revealing Pathways In COPD-Associated Lung Cancer Large-Scale Quantitative Multiomic Analysis

Brian Sandri

June 4

10:30

Poster Session, Odd Numbered

Poster ThP 455: A Novel Analytical-Informatics Platform Reveals the Hidden Tryptic Peptidome and Improves Multi-omic Applications

Candace Guerrero

Poster ThP 467: Combining ribosome profiling and proteomics to discover micropeptides, translation products from small open reading frames

Volodimir Olexiouk

Poster

12:00

Poster Session, Even Numbered

Poster ThP 468: Automated classification of translated genomic elements identified by proteomics informed by transcriptomics

Shyamasree Saha

Workshop 4: The Galaxy Framework for MS-based Informatics

Monday, 5:45-7:00 PM, Room 123/124
Tim Griffin (presiding), University of Minnesota

This workshop will provide attendees a look at some emerging applications in biological MS that are challenging to researchers, and where Galaxy offers an informatics solution. Informal presentations will be given by experts on these applications, with a focus on providing useful details on how these software and workflows can be accessed and used immediately. Audience questions and discussion on usability and other issues will be fielded and facilitated. An informal panel discussion with the presenters will follow the presentations.

Presenters and expected topics will include:

Talk

Topic

Speaker

Links

1.

The Proteoformer Pipeline for RiboProfiling and MS-based Proteomics

Gerben Menschaert, Ghent University

2.

Galaxy-based PeptideShaker tools and applications, with a focus on downstream applications

Ira Cooke, La Trobe University / Pratik Jagtap, University of Minnesota

Slides

3.

Targeted Proteomics tools in Galaxy

Shyamasree Saha, Queen Mary University of London

Ample time will be offered for questions from attendees and discussion. Presenters will be available for an informal panel discussion in the final part of the workshop.


Galaxy-P at ASMS 2015

Flyer

You are encouraged to print this handy flyer prepared by the Galaxy-P Project and take with you.