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Events/ECCB2014

Galaxy at ECCB'14 / JOBIM

Galaxy at ECCB'14

There were several sessions and posters featuring Galaxy at the 13th European Conference on Computational Biology (ECCB'14). ECCB'14 was held in Strasbourg, France, from September 6 to 10, 2014.

Date

Time

Topic/Event

Links

Contact

September 6

09:00-18:00

T07: Scientific Workflows for Analysing, Integrating and Scaling Bioinformatics Data: a Practical Introduction to Galaxy, Taverna and WS-PGRADE

All on Dropbox
Introduction
Galaxy slides & hands-on
Taverna
WS-PGRADE

Katy Wolstencroft, Hailiang (Leon) Mei, Sílvia Olabarriaga

September 8

18:30-19:30

A45: A targeted metagenomic analysis pipeline dedicated to Ion Torrent PGM Data

Alexandre Loywick, Gael Even, Sophie Merlin, Renaud Blervaque and Christophe Audebert

G03: Galaxydx – a web-server dedicated to ngs diagnosis data analyses

Poster

Vivien Deshaies, Alban Lermine and Elodie Girard

J47: Genome-wide TALEN off-target prediction and its utility for TALEN design

Jan Grau, Jens Boch and Stefan Posch

J57: MetaGenSense: A Web application for analysis and visualization of High throughput Sequencing metagenomic data

Poster

Damien Correia, Olivia Doppelt-Azeroual, Jean-Baptiste Denis, Mathias Vandenbogaert and Valérie Caro

19:30-20:30

J04: SMITH: managing NGS data and workflows in a sequencing facility

Poster

Yuriy Vaskin, Francesco Venco and Heiko Muller

J24: GalaxEast: an open and powerful Galaxy instance for integrative Omics data analysis

Poster

Stephanie Le Gras, Serge Uge, Matthieu Jung, Ludovic Roy, Valerie Cognat, Frederic Plewniak, Irwin Davidson and Julien Seiler

September 8+9

13:30-14:00

ID01: Bringing the tools to the data - Providing scientists with personalized and on-demand bioinformatics services on the cloud of the French Institute of Bioinformatics

Christophe BLANCHET, Jean-François GIBRAT

14:00-14:30

ID02: A panel of European Public Galaxy Instances
1. Galaxy Project Introduction
2. deepTools: user-friendly tools for data visualization
3. The Nebula ChIP-Seq web service
4. The French Institute of Bioinformatics (IFB) academic cloud infrastructure for life sciences


1. Slides
2. Slides

Hans-Rudolf Hotz, Björn Grüning, Alban Lermine, Christophe Blanchet