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attachment:libraries_1.py of Events/GCC2013/TrainingDay/API

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   1 #!/usr/bin/env python
   2 
   3 """
   4 Access a Galaxy instance and get data for Libraries.
   5 
   6 Pretty standard get and show at this point.
   7 """
   8 import os
   9 import sys
  10 import pprint
  11 
  12 import setup
  13 import common
  14 
  15 # the REST URL for the library resource
  16 RESOURCE_URL = '/api/libraries'
  17 
  18 # ----------------------------------------------------------------------------- functions
  19 def get_libraries():
  20     """
  21     Return a list of dictionaries that describe the current user's libraries.
  22     """
  23     apikey = setup.get_apikey()
  24     full_url = setup.get_base_url() + RESOURCE_URL
  25     return common.get( apikey, full_url )
  26 
  27 def get_library( library_id ):
  28     """
  29     Return a dictionary that the gives details of a specific library.
  30     """
  31     apikey = setup.get_apikey()
  32     resource_url = setup.get_base_url() + RESOURCE_URL
  33 
  34     full_url = resource_url + '/' + library_id
  35     return common.get( apikey, full_url )
  36 
  37 
  38 # ----------------------------------------------------------------------------- main
  39 if __name__ == '__main__':
  40     # double duty
  41     if   len( sys.argv ) <= 1:
  42         # no args: get all libraries
  43         returned = get_libraries()
  44         pprint.pprint( returned, indent=2 )
  45 
  46     elif len( sys.argv ) <= 2:
  47         # 1 arg: get a specific library
  48         library_id = sys.argv[1]
  49         returned = get_library( library_id )
  50         pprint.pprint( returned, indent=2 )

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  • [get | view] (2013-06-24 16:01:09, 8.2 KB) [[attachment:Galaxy-Workflow-Joined_Solexa_QC.ga]]
  • [get | view] (2013-06-24 16:46:36, 14.0 KB) [[attachment:all-scripts.tar.gz]]
  • [get | view] (2013-06-24 16:01:23, 5.2 KB) [[attachment:common.py]]
  • [get | view] (2013-06-24 16:04:07, 0.9 KB) [[attachment:datasets_1.py]]
  • [get | view] (2013-06-24 16:04:15, 1.2 KB) [[attachment:datasets_2.py]]
  • [get | view] (2013-06-24 16:04:22, 3.4 KB) [[attachment:datasets_3.py]]
  • [get | view] (2013-06-24 16:04:33, 1.5 KB) [[attachment:hdas_1.py]]
  • [get | view] (2013-06-24 16:04:50, 1.7 KB) [[attachment:hdas_2.py]]
  • [get | view] (2013-06-24 16:05:07, 2.2 KB) [[attachment:hdas_3.py]]
  • [get | view] (2013-06-24 16:03:38, 0.9 KB) [[attachment:histories_1.py]]
  • [get | view] (2013-06-24 16:03:52, 2.1 KB) [[attachment:histories_2.py]]
  • [get | view] (2013-06-24 16:05:25, 2.2 KB) [[attachment:histories_3.py]]
  • [get | view] (2013-06-24 16:05:34, 3.3 KB) [[attachment:lddas_1.py]]
  • [get | view] (2013-06-24 16:05:41, 1.3 KB) [[attachment:libraries_1.py]]
  • [get | view] (2013-06-24 16:01:36, 0.8 KB) [[attachment:setup.py]]
  • [get | view] (2013-06-24 16:02:45, 1.1 KB) [[attachment:step_1.py]]
  • [get | view] (2013-06-24 16:07:15, 9.9 KB) [[attachment:step_10.py]]
  • [get | view] (2013-06-24 16:03:28, 1.4 KB) [[attachment:step_2.py]]
  • [get | view] (2013-06-24 16:06:01, 1.6 KB) [[attachment:step_3.py]]
  • [get | view] (2013-06-24 16:06:11, 1.1 KB) [[attachment:step_4.py]]
  • [get | view] (2013-06-24 16:06:20, 1.9 KB) [[attachment:step_5.py]]
  • [get | view] (2013-06-24 16:06:44, 2.5 KB) [[attachment:step_6.py]]
  • [get | view] (2013-06-24 16:06:53, 4.9 KB) [[attachment:step_7.py]]
  • [get | view] (2013-06-24 16:07:05, 5.9 KB) [[attachment:step_8.py]]
  • [get | view] (2013-06-30 13:51:46, 8.0 KB) [[attachment:step_9.py]]
  • [get | view] (2013-06-24 16:41:51, 1.8 KB) [[attachment:tools_1.py]]
  • [get | view] (2013-06-24 16:44:32, 2.0 KB) [[attachment:upload_to_history.py]]
  • [get | view] (2013-06-24 16:03:03, 1.3 KB) [[attachment:users_1.py]]
  • [get | view] (2013-06-24 16:44:44, 2.9 KB) [[attachment:workflows_1.py]]
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