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1st German Galaxy Developer workshop, Thursday, October 2nd, Freiburg

In addition to the 2nd Swiss Galaxy Workshop, we will organize a Galaxy Developer Workshop in Freiburg.

Preliminary Schedule





9:15 - 9:30


9:30 - 9:45

Björn Grüning (University of Freiburg)

Introduction: Galaxy as Developer Platform

9:45 - 10:15

Nicola Soranzo (CRS4)

BioBlend and BioBlend.objects: high level API for scripting Galaxy analyses


10:15 - 10:45

Jürgen Reymann

Automated Data Pipelines & Intelligent Microscopy


11:15 - 11:45

Sebastian Wilzbach

BioJS 2: taking biological visualization to the next level

pdf, video

11:45 - 13:00

Lunch Break (we will need to find some food nearby)

13:00 - 13:30

Sebastian Schaaf

Galaxy deployment joy in Munich

13:30 - 14:00

Björn Grüning (University of Freiburg)

Interactive Environments: IPython in Galaxy

14:30 - 15:30

Open Discussion

15:30 - 16:00

DEPARTURE (... and going to the city)

This schedule will most likely change. It will be adapted according to the progress we make during the day and topics we want to discuss.


The developer day will be held in the Biology department (Room -01.131) of the Universität of Freiburg. The room is located in the basement of the Biology II/III building, Schänzlestrasse 1.

Food map

We have created a small map of places to find food and drinks for the lunch.


Contact Hans-Rudolf Hotz or Björn Grüning