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3rd Swiss Galaxy Workshop, Thursday, October 20th, Freiburg (Germany)

After the big success of the first Swiss Galaxy Workshop and the second Swiss Galaxy Workshop, we are going to organize a similar event again in fall 2016.

Topic of the Workshop

This year, the workshop is aimed at Galaxy administrators and will collocate with the Oktober meetup of the Galaxy-Admins discussion group. Similar to the regular Galaxy-Admins web-meetups, we intend to have a mixture of presentations about the use of the Galaxy framework and informations about the latest developments. We encourage presentations about your success stories using Galaxy as well as the problems you have encountered. Please indicate a preliminary title on the registration page.






9:15 - 9:30


9:30 - 9:45

Hans-Rudolf Hotz (FMI), Björn Grüning (University of Freiburg)



9:45 - 10:30

Dannon Baker

State of the Galaxy Project - priorities, plans, and community

10:30 - 11:00

Coffee Break

11:00 - 11:30

Nicola Soranzo

News from the IUC and the Galaxy tool ecosystem


11:30 - 12:00

Abdulrahman Azab

Deploying Galaxy in a secure environment to analyse sensitive data

slides , docker provisioning trick

12:00 - 13:10

Lunch Break in nearby restaurants

13:10 - 13:35

Bérénice Batut

Galaxy Training Network - rebooted

13:35 - 14:10

Roland Fehrenbacher

Debian Med - Debian for medicine and life sciences

14:10 - 14:40

Wolfgang Maier

CosmicNotes - Documenting your work in Galaxy

14:40 - 15:00

Jochen Bick

Long way to solve short ncRNA data analysis problems – evaluation of small RNA-Seq datasets from non-model organisms in Galaxy

15:00 - 15:30

Coffee Break

15:30 - 16:00

Devon Ryan / Stephan Nothjunge

deepTools and HiCExplorer

16:00 - 16:30

Nikolay Vazov

Customizing Galaxy for Large Institutions


16:30 - 16:45

Coffee Break

16:45 - 18:00

lightning talks: Kristian Peters, Jelle Scholtalbers

18:00 - 18:01

Hans-Rudolf Hotz, Björn Grüning

concluding remarks ...going back to town

19:00 - open end

....we have a reservation at Ganter Brauereiausschank at 7PM

Location / Registration

The workshop will be held at the Universität of Freiburg in Germany (see the main page for details).


Contact Hans-Rudolf Hotz or Björn Grüning