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[[http://www.igmm.ac.uk/|{{attachment:Images/Logos/IGMMLogo.jpg|Institute of Genetics and Molecular Medicine|height="200"}}]] [[http://www.igmm.ac.uk/|{{attachment:Images/Logos/IGMMLogo.jpg|Institute of Genetics and Molecular Medicine|height="150"}}]]

Institute of Genetics and Molecular Medicine
Introduction to Galaxy
13 May 2014

9:00-16:30
MRC Institute of Genetics and Molecular Medicine
Western General Hospital, Crewe Road, Edinburgh, United Kingdom

Directions


Instructor
Dave Clements, Johns Hopkins University

Audience

Are you a life science researcher who needs to do complex analysis on large datasets?

Galaxy is an open, web-based platform for data intensive biological research that enables non-bioinformaticians to create, run, tune, and share their own bioinformatic analyses.

These hands-on workshops will teach participants how to integrate data, and perform simple and complex analysis within Galaxy. They will also cover data visualization and visual analytics, and how to share and reuse your bioinformatic analyses, all from within Galaxy.

No programming or Linux command line experience is required.

Registration

   Registration link coming soon   

Anyone affiliated with the IGMM can participate in this workshop.

Agenda

Time

Topic

8:30

Introduction

Welcome, Logistics, Galaxy Platforms, and Galaxy 101

10:00

Break

Exercise: Galaxy 101.5

10:15

Introduction continued

Repeatable workflows; Quality Control 1

11:00

Lunch

12:45

RNA-Seq Example

Quality Control 2, Mapping and Splice Junction Identification, Differential Expression, and Galaxy Community

14:45

Break

15:00

...

...

17:00

Done

Note: This is a hands-on workshop! Please bring a wifi-enabled laptop.


Amazon Web Services

May 2014 Galaxy UK Tour

Support

This workshop is generously supported by the MRC Institute of Genetics and Molecular Medicine at The University of Edinburgh and an AWS in Education grant award.

Galaxy May 2014 UK Tour

This workshop is part of the May 2014 Galaxy UK Tour, which features events in Norwich, as well as other events in Edinburgh.

Slides

Questions?

Contact Galaxy Outreach <outreach AT galaxyproject DOT org>.