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Tools/SampleToolTemplate

Sample Tool File Template

This is the basic tool file template that you can start with while creating a tool for Galaxy. Sometimes the tool definition file is also referred to as 'wrapper' or 'tool wrapper'.

   1 <tool id="TYPE_ID_HERE" name="TYPE_NAME_HERE">
   2 
   3     <description>TYPE_DESCRIPTION_HERE</description>
   4 
   5     <command interpreter="TYPE_INTERPRETER_NAME_HERE">TYPE_COMMAND_HERE</command>
   6 
   7     <inputs>
   8 
   9         <param format="bed" name="input1" type="data" label="TYPE_LABEL_HERE" help="ANY_FURTHER_INFO">
  10 
  11     </inputs>
  12 
  13     <outputs>
  14 
  15         <data format="TYPE_FORMAT_HERE" name="out_file1" />
  16   
  17     </outputs>
  18 
  19 <help>
  20 
  21 .. class:: infomark
  22 
  23 IMPORTANT INFORMATION
  24 
  25 ----
  26 
  27 WRITE HELP HERE
  28 
  29 </help>
  30 
  31 <citations>
  32 
  33     <citation type="doi">ENTER DOI NUMBER HERE</citation>
  34 
  35 </citations>
  36 
  37 </tool>